Institut for Kemi

Danish Center for Ultrahigh Field NMR Spectroscopy

Aarhus Universitets segl

Publications

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Kirkegaard, K., Svane, A. S. P., Hindkjær, J. J., Nielsen, N. C. & Ingerslev, H. J. (2013). Metabolic profiles of spent culture media does not predict pregnancy outcome. Abstract fra European Society of Human Reproduction and Embryology 29th annual meeting, London, Storbritannien.
Malmendal, A., Sørensen, J. G., Overgaard, J., Holmstrup, M., Nielsen, N. C. & Loeschcke, V. (2013). Metabolomic analysis of the selection response of Drosophila melanogaster to environmental stress: are there links to gene expression and phenotypic traits? Naturwissenschaften, 100, 417–427.
Underhaug, J., Koldsø, H., Runager, K., Nielsen, J. T., Sørensen, C. S., Kristensen, T., Otzen, D., Karring, H., Malmendal, A., Schiøtt, B., Enghild, J. J. & Nielsen, N. C. (2013). Mutation in transforming growth factor beta induced protein associated with granular corneal dystrophy type 1 reduces the proteolytic susceptibility through local structural stabilization. BBA General Subjects, 1834(12), 2812–2822. https://doi.org/10.1016/j.bbapap.2013.10.008
Kehlet, C., Del Federico, E., Schahbaz, H., Catalano, A., Dittmer, J. & Nielsen, N. C. (2013). Non-invasive characterization of polymeric materials in relation to art conservation using unilateral NMR combined with multivariate data analysis. Analytical Methods, 5(17), 4480-4486. https://doi.org/10.1039/c3ay40650d
Laustsen, C., Bowen, S., Vinding, M. S., Nielsen, N. C. & Ardenkjær-Larsen, J. H. (2013). OPTIMAL CONTROL SINGLET STATE STORAGE FOR CLINICAL MR SYSTEMS. Abstract fra ISMRM 2013, Salt Lake City, USA.
Vinther, J. M., Khaneja, N. & Nielsen, N. C. (2013). Robust and Efficient 19F Heteronuclear Dipolar Decoupling using Refocused Continuous-Wave Rf Irradiation. Journal of Magnetic Resonance. https://doi.org/10.1016/j.jmr.2012.11.003
Hansen, L., Unmack Larsen, E. K., Nielsen, E. H., Iversen, F., Liu, Z., Thomsen, K., Pedersen, M., Skrydstrup, T., Nielsen, N. C., Ploug, M. & Kjems, J. (2013). Targeting of peptide conjugated magnetic nanoparticles to urokinase plasminogen activator receptor (uPAR) expressing cells. Nanoscale, 5, 8192-8201. https://doi.org/10.1039/c3nr32922d
Nielsen, S. B., Macchi, F., Raccosta, S., Langkilde, A. E., Giehm, L., Kyrsting, A., Svane, A. S. P., Manno, M., Christiansen, G., Nielsen, N. C., Oddershede, L., Vestergaard, B. & Otzen, D. (2013). Wildtype and A30P Mutant Alpha-Synuclein Form Different Fibril Structures. PLoS One, 8(7), Artikel e67713. https://doi.org/10.1371/journal.pone.0067713
Larsen, E. K. U., Nielsen, T., Wittenborn, T., Rydtoft, L. M., Lokanathan, A. R., Hansen, L., Østergaard, L., Kingshott, P., Howard, K. A., Besenbacher, F., Nielsen, N. C. & Kjems, J. (2012). Accumulation of magnetic iron oxide nanoparticles coated with variably sized polyethylene glycol in murine tumors. Nanoscale, 4(7), 2352-2361 . https://doi.org/10.1039/C2NR11554A
Loening, N. M., Bjerring, M., Nielsen, N. C. & Oschkinat, H. (2012). A comparison of NCO and NCA transfer methods for biological solid-state NMR spectroscopy. Journal of Magnetic Resonance, 214, 81-90. https://doi.org/10.1016/j.jmr.2011.10.012
Laustsen, C., Østergaard, J., Lauritzen, M. H., Nørregaard, R., Ringgaard, S., Søgaard, L. V.-C., Bowen, S., Nielsen, N. C., Flyvbjerg, A., Pedersen, M. & Ardenkjær-Larsen, J. H. (2012). Assessment of diabetic nephropathy with Hyperpolarized [1-13C]Pyruvate. I ISMRM
Nielsen, J. T., Eghbalnia, H. R. & Nielsen, N. C. (2012). Chemical shift prediction for protein structure calculation and quality assessment using an optimally parameterized force field. Progress in Nuclear Magnetic Resonance Spectroscopy, 60, 1-28. https://doi.org/10.1016/j.pnmrs.2011.05.002
Slotsbo, S., Hansen, L. M., Jordaens, K., Backeljau, T., Malmendal, A., Nielsen, N. C. & Holmstrup, M. (2012). Cold tolerance and freeze-induced glucose accumulation in three terrestrial slugs. Comparative Biochemistry and Physiology -Part A : Molecular and Integrative Physiology, 161(4), 443-449. https://doi.org/10.1016/j.cbpa.2012.01.002
Bretschneider, C., Karabanov, A., Nielsen, N. C. & Köckenberger, W. (2012). Conversion of parahydrogen induced longitudinal two-spin order to evenly distributed single spin polarisation by optimal control pulse sequences. Journal of Chemical Physics, 136(9), 094201. https://doi.org/10.1063/1.3691193
Hjørringgaard, C. U., Vad, B. S., Matchkov, V., Nielsen, S. B., Vosegaard, T., Nielsen, N. C., Otzen, D. & Skrydstrup, T. (2012). Cyclodextrin-Scaffolded Alamethicin with Remarkably Efficient Membrane Permeabilizing Properties and Membrane Current Conductance. Journal of Physical Chemistry Part B: Condensed Matter, Materials, Surfaces, Interfaces & Biophysical, 116(26), 7652-7659. https://doi.org/10.1021/jp2098679
Nielsen, N. C., Straasø, L. A. & Nielsen, A. B. (2012). Dipolar Recoupling. Topics in Current Chemistry, 306, 1-45.
Jain, S. K., Bjerring, M. & Nielsen, N. C. (2012). Efficient and Robust Heteronuclear Cross-Polarization for High-Speed-Spinning Biological Solid-State NMR Spectroscopy. The Journal of Physical Chemistry Letters, 3, 703-708.
Vinding, M. S., Maximov, I., Tosner, Z. & Nielsen, N. C. (2012). Fast Numerical Design of Spatial-Selective RF Pulses in MRI using Krotov and Quasi-Newton Based Optimal Control Methods. Journal of Chemical Physics, 137.
Vinding, M. S., Maximov, I., Tosner, Z. & Nielsen, N. C. (2012). Fast Optimal Control in MRI. Poster-session præsenteret på QUAINT, Southampton, Storbritannien.
Kristensen, T. N., Overgaard, J., Hoffmann, A. A., Nielsen, N. C. & Malmendal, A. (2012). Inconsistent effects of developmental temperatureacclimation on low-temperature performance andmetabolism in Drosophila melanogaster. Evolutionary Ecology Research, 14, 821-837. http://www.evolutionary-ecology.com/
Kulminskaya, N., Pedersen, M. Ø., Bjerring, M., Underhaug, J., Miller, M., Frigaard, N.-U., Nielsen, J. T. & Nielsen, N. C. (2012). In situ solid-state NMR of protein complexes in heterogeneous biological membranes: The baseplate antenna-complex of Chlorobaculum tepidum. Angewandte Chemie International Edition, 51(28), 6891-6895. https://doi.org/10.1002/anie.201201160
Burhardt, M., Taaning, R. H., Nielsen, N. C. & Skrydstrup, T. (2012). Isotope-Labeling of the Fibril Binding Compound FSB via a Pd-Catalyzed Double Alkoxycarbonylation. Journal of Organic Chemistry, 77(12), 5357-5363. https://doi.org/10.1021/jo300746x
Calcutta, A., Jessen, C. M., Behrens, M. A., Oliveira, C. L. P., Renart, M. L., González-Ros, J. M., Otzen, D., Pedersen, J. S., Malmendal, A. & Nielsen, N. C. (2012). Mapping of unfolding states of integral helical membrane proteins by GPS-NMR and scattering techniques: TFE-induced unfolding of KcsA in DDM surfactant. Biochimica et Biophysica Acta - Biomembranes, 1818(9), 2290-301. https://doi.org/10.1016/j.bbamem.2012.04.005
Bertelsen, K., Dorosz, J., Hansen, S. K., Nielsen, N. C. & Vosegaard, T. (2012). Mechanisms of Peptide-Induced Pore Formation in Lipid Bilayers Investigated by Oriented 31P Solid-State NMR Spectroscopy. PLoS One, 7(10). https://doi.org/10.1371/journal.pone.0047745
Andreasen, M., Nielsen, S. B., Mittag, T., Bjerring, M., Nielsen, J. T., Zhang, S., Nielsen, E. H., Jeppesen, M., Christiansen, G., Besenbacher, F., Dong, M., Nielsen, N. C., Skrydstrup, T. & Otzen, D. E. (2012). Modulation of fibrillation of hIAPP core fragments by chemical modification of the peptide backbone. Biochimica et Biophysica Acta - Proteins and Proteomics, 1824(2), 274-85. https://doi.org/10.1016/j.bbapap.2011.10.014
Laustsen, C., Bowen, S., Vinding, M. S., Nielsen, N. C. & Ardenkjær-Larsen, J. H. (2012). Optimal Control Singlet State Storage of hyperpolarized compounds. I Optimal Control Singlet State Storage of hyperpolarized compounds
Andreasen, M., Nielsen, S. B., Runager, K., Christiansen, G., Nielsen, N. C., Enghild, J. J. & Otzen, D. (2012). Polymorphic Fibrillation of the Destabilized Fourth Fasciclin-1 Domain Mutant A546T of the Transforming Growth Factor-β-induced Protein (TGFBIp) Occurs through Multiple Pathways with Different Oligomeric Intermediates. Journal of Biological Chemistry, 287(41), 34730-34742. https://doi.org/10.1074/jbc.M112.379552
Bjerring, M. M., Jensen, B. P., Oschkinat, H. H., Akbey, U. & Nielsen, N. C. (2012). Rapid solid-state NMR of deuterated proteins by interleaved cross-polarization from 1 H and 2 H nuclei. Journal of Magnetic Resonance, 214, 324-328. https://doi.org/10.1016/j.jmr.2011.10.020
Vinther, J. M., Nielsen, A. B., Bjerring, M., van Eck, E., Kentgens, A., Khaneja, N. & Nielsen, N. C. (2012). Refocused continuous-wave decoupling: A new approach to heteronuclear dipolar decoupling in solid-state NMR spectroscopy. Journal of Chemical Physics, 137(21), 214202. https://doi.org/10.1063/1.4768953
Bundgaard, E., Hagemann, O., Bjerring, M., Nielsen, N. C., Andreasen, J. W., Andreasen, B. & Krebs, F. C. (2012). Removal of Solubilizing Side Chains at Low Temperature: A New Route to Native Poly(thiophene). Macromolecules, 45(8), 3644-3646. https://doi.org/10.1021/ma300075x
Kalashnyk, N., Nielsen, J. T., Nielsen, E. H., Skrydstrup, T., Otzen, D., Lægsgaard, E., Wang, C., Besenbacher, F., Nielsen, N. C. & Linderoth, T. R. (2012). Scanning tunneling microscopy reveals single-molecule insights into the self-assembly of amyloid fibrils. A C S Nano, 6(8), 6882-6889. https://doi.org/10.1021/nn301708d
Nielsen, A. B., Nielsen, N. C., Gath, J., Székely, K., Ernst, M. & Meier, B. H. (2012). Simultaneous acquisition of PAR and PAIN spectra. Journal of Biomolecular N M R, Volume 52(Issue 4), 283-288. https://doi.org/10.1007/s10858-012-9616-7
Sarup, P. M., Pedersen, S. M., Nielsen, N. C., Malmendal, A. & Loeschcke, V. (2012). The metabolic profile of long-lived Drosophila melanogaster. PLoS One, 7(10), e47461. https://doi.org/10.1371/journal.pone.0047461
Wittenborn, T., Nielsen, T., Nygaard, J. V., Larsen, E. K. U., Thim, T., Rydtoft, L. M., Vorup-Jensen, T., Kjems, J., Nielsen, N. C., Horsman, M. R. & Falk, E. (2012). Ultra-High-Field DCE-MRI of Angiogenesis in a Novel Angiogenesis Mouse Model. Journal of Magnetic Resonance Imaging, 35(3), 703-710. https://doi.org/10.1002/jmri.22855
Sanggaard, K. W., Danielsen, C. C., Wogensen, L., Vinding, M. S., Rydtoft, L. M., Mortensen, M. B., Karring, H., Nielsen, N. C., Wang, T., Thøgersen, I. B. & Enghild, J. J. (2012). Unique structural features facilitate lizard tail autotomy. PLoS One, 7(12), e51803. https://doi.org/10.1371/journal.pone.0051803
Pedersen, S. M., Nebel, C., Nielsen, N. C., Andersen, H. J., Olsson, J., Simrén, M., Öhman, L., Svensson, U., Bertram, H. C. S. & Malmendal, A. (2011). A GC-MS-based metabonomic investigation of blood serum from irritable bowel syndrome patients undergoing intervention with acidified milk products. European Food Research and Technology, 233(6), 1013-1021. https://doi.org/10.1007/s00217-011-1599-1
Vestergaard-Poulsen, P., Wegener, G., Hansen, B., Bjarkam, C. R., Blackband, S. J., Nielsen, N. C. & Jespersen, S. N. (2011). Diffusion-weighted MRI and quantitative biophysical modeling of hippocampal neurite loss in chronic stress. PLoS One, 6(7), e20653. https://doi.org/10.1371/journal.pone.0020653
Runager, K., Basaiawmoit, R. V., Deva, T., Andreasen, M., Valnickova, Z., Sørensen, C. S., Karring, H., Thøgersen, I. B., Christiansen, G., Underhaug, J., Kristensen, T., Nielsen, N. C., Klintworth, G. K., Otzen, D. E. & Enghild, J. J. (2011). Human Phenotypically Distinct TGFBI Corneal Dystrophies Are Linked to the Stability of the Fourth FAS1 Domain of TGFBIp. Journal of Biological Chemistry, 286(7), 4951-8. https://doi.org/10.1074/jbc.M110.181099
Bertelsen, K., Vad, B., Nielsen, E. H. T., Hansen, S. K., Skrydstrup, T., Otzen, D., Vosegaard, T. & Nielsen, N. C. (2011). Long-term-stable ether-lipid vs conventional ester-lipid bicelles in oriented solid-state NMR: altered structural information in studies of antimicrobial peptides. Journal of Physical Chemistry Part B: Condensed Matter, Materials, Surfaces, Interfaces & Biophysical, 115(8), 1767-1774. https://doi.org/10.1021/jp110866g
Nielsen, A. B., Jain, S. K. & Nielsen, N. C. (2011). Low-power homonuclear dipolar recoupling using supercycled symmetry-based and exponentially-modulated pulse sequences. Chemical Physics Letters, 503, 310-315.
Pedersen, S. M., Samuelsson, A., Svensson, U., Rafter, J., Petterson, S., Nielsen, N. C., Bertram, H. C. & Malmendal, A. (2011). Metabonomic Effects of Strain and Delivering Method in Probiotic Fed Mice Induced with Mild Colitis. World Journal of Gastroenterology.
Vinther, J. M. & Nielsen, N. C. (2011). Notes on NMR spectroscopy: an introduction to the principles of NMR spectroscopy. Kemisk Institut, Aarhus Universitet.
Wei, D., Akbey, U., Jensen, B. P., Oschkinat, H., Reif, B., Bjerring, M. & Nielsen, N. C. (2011). Optimal 2H rf pulses and 2H-13C cross-polarization methods for solid-state 2H MAS NMR of perdeuterated proteins. The Journal of Physical Chemistry Letters, 2(11), 1289-1294. https://doi.org/10.1021/jz200511b
Vinding, M. S., Maximov, I., Tosner, Z., Jespersen, S. N. & Nielsen, N. C. (2011). Optimal Control Theory in Magnetic Resonance Imaging: Global Optima for 2DRF pulses. Poster-session præsenteret på 32nd Annual Danish NMR Meeting, Korsør, Danmark.
Kehlet, C., Nielsen, J. T., Tosner, Z. & Nielsen, N. C. (2011). Resolution-Enhanced Solid-State NMR 13C-13C Correlation Spectroscopy by Optimal Control Dipolar-Driven Spin-State-Selective Coherence Transfer. The Journal of Physical Chemistry Letters, 2, 543-547.
Weber, M., Schneider, D., Prodöhl, A., Dreher, C., Becker, C., Underhaug, J., Svane, A. S. P., Malmendal, A., Nielsen, N. C. & Otzen, D. (2011). SDS-facilitated in vitro formation of a transmembrane B-type cytochrome is mediated by changes in local pH. Journal of Molecular Biology, 407(4), 594-606. https://doi.org/10.1016/j.jmb.2011.02.005
Bak, M., Rasmussen, J. T. & Nielsen, N. C. (2011). SIMPSON - An important driver for numerical simulations in solid-state NMR spectroscopy. Journal of Magnetic Resonance, 213(2), 401-403. https://doi.org/10.1016/j.jmr.2011.08.002
Pedersen, M. Ø., Linnanto, J., Frigaard, N.-U., Nielsen, N. C. & Miller, M. (2010). A model of the protein-pigment baseplate complex in chlorosomes of photosynthetic green bacteria. Photosynthesis Research, 104(2-3), 233-243. https://doi.org/10.1007/s11120-009-9519-y
Maximov, I. I., Salomon, J., Turinici, G. & Nielsen, N. C. (2010). A smoothing monotonic convergent optimal control algorithm for nuclear magnetic resonance pulse sequence design. Journal of Chemical Physics, 132(8). https://doi.org/10.1063/1.3328783
Laustsen, C., Ringgaard, S., Pedersen, M. & Nielsen, N. C. (2010). Binomial Sequence for Selective Quadrupolar 23Na in Vitro and in Vivo NMR and MRI. Abstract fra ISMRM, Stockholm, Sverige.

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Revideret 30.06.2026
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Fie Noer Christensen