Department of Chemistry

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Publications

The Department of Chemistry is one of the most productive departments at Aarhus University. A considerable number of articles are published every year. 

Publications from the Department of Chemistry

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Deen, G. R., Oliveira, C. L. P. & Pedersen, J. S. (2009). Phase Behavior and Kinetics of Phase Separation of a Nonionic Microemulstion of C12E5/Water/1-Chlorotetradecane upon a Temperature Quench: . Journal of Physical Chemistry Part B: Condensed Matter, Materials, Surfaces, Interfaces & Biophysical, 113, 7138-7146.
Dorosz, J., Volinsky, R., Bazar, E., Kolusheva, S. & Jelinek, R. (2009). Phospholipid-induced fibrillation of a prion amyloidogenic determinant at the air/water interface. Langmuir, 25(21), 12501-6. https://doi.org/10.1021/la901750v
Rajput, J., Rahbek, D. B., Andersen, L. H., Rinza, T. R., Christiansen, O., Bravaya, K. B., Erokhin, A. V., Bochenkova, A. V., Solntsev, K. M., Dong, J., Kowalik, J., Tolbert, L. M., Åxman Petersen, M. & Brøndsted Nielsen, M. (2009). Photoabsorption studies of neutral green fluorescent protein model chromophores in vacuo. Physical Chemistry Chemical Physics, 11, 9996-10002. https://doi.org/10.1039/b914276b
Gara, P. M. D., Bosio, G. N., Arce, V. B., Poulsen, L., Ogilby, P. R., Giudici, R., Gonzalez, M. C. & Martire, D. O. (2009). Photoinduced Degradation of the Herbicide Clomazone. Model Reactions for Natural and Technical Systems. Photochemistry and Photobiology, 85, 686-692.
Svendsen, H., Overgaard, J., Chevallier, M.-A. S. & Collet, E. (2009). Photomagnetic Switching of the Complex [Nd(dmf)4(H2O)3(μ-CN)Fe(CN)5].H2O Analyzed by Single-Crystal X-Ray Diffraction. Angewandte Chemie International Edition, 48, 2780-2783.
Breitenbach, T., Kuimova, M., Gbur, P., Hatz, S., Schack, N. B., Pedersen, B. W., Lambert, J. D. C., Poulsen, L. & Ogilby, P. R. (2009). Photosensitized production of singlet oxygen: spatially-resolved optical studies in single cells. Photochemical & Photobiological Sciences, 8, 442-452.
Yan, Y., Keizer, A. D., Martens, A. A., Oliveira, C. L. P., Pedersen, J. S., Wolf, F. A. D., Dreschler, M., Stuart, M. A. C. & Besseling, N. A. M. (2009). Polyptide Nanoribbon Hydrogels Assembled throgh Multiple Supramolecular Interactions. Langmuir, 25, 12899-12908.
Allman, S. A., Jensen, H. H., Vijayakrishnan, B., Garnet, J. A., Leon, E., Liu, Y., Anthony, D. C., Sibson, N. R., Feizi, T., Matthews, S. & Davis, B. G. (2009). Potent Fluoro-oligosaccharide Probes of Adhesion in Toxoplasmosis. ChemBioChem, 10, 2522-2529.
Voeghtly, L. M., Thøgersen, I., Valnickova, Z., Sanggaard, K. W., Chu, C. T., Oury, T. D. & Enghild, J. J. (2009). Potential Clinical Importance of the Activation Peptide of Prostate-specific Antigen. International Journal of Clinical and Experimental Pathology, 2(6), 588-98.
Sparta, M., Hoyvik, I.-M., Toffoli, D. & Christiansen, O. (2009). Potential Energy Surfaces for Vibrational Structure Calculations from a Multiresolution Adaptive Density-Guided Approach: Implementation and Test Calculations. Journal of Physical Chemistry Part A: Molecules, Spectroscopy, Kinetics, Environment and General Theory, 113(30), 8712-8723.
Thøgersen, J., Gadegaard, A., Nielsen, J. B., Jensen, S. K., Petersen, C. & Keiding, S. R. (2009). Primary Formation Dynamics of Peroxynitrite Following Photolysis of Nitrate. Journal of Physical Chemistry Part A: Molecules, Spectroscopy, Kinetics, Environment and General Theory, 113(39), 10488-10494. https://doi.org/10.1021/jp906354c
Sneppen, K., Lizana, G. L., Jensen, M. H., Pigolotti, S. & Otzen, D. (2009). Proteasome-Fibrillation Antagonism in a Dynamic Model for Parkinson’s Disease. Physical Biology, 6, 36005.
Kilic, N., Stensballe, A., Otzen, D. & Dönmez, G. (2009). Proteomic changes in response to chromium(VI) toxicity in Pseudomonas aeruginosa . Bioresource Technology, 101, 2134-2140.
Yatime, L., Buch-Pedersen, M. J., Musgaard, M., Morth, J. P., Winther, A.-M. L., Pedersen, B. P., Olesen, C. E., Andersen, J. P., Vilsen, B., Schiøtt, H. B., Palmgren, M., Møller, J. V., Nissen, P. & Fedosova, N. (2009). P-type ATPases as drug targets: Tools for medicine and science. Biochimica et biophysica acta. Bioenergeticss, 1787(4), 207-20.
Filsinger, F., Küpper, J., Meijer, G., Hansen, J. L., Maurer, J., Nielsen, J. H., Holmegaard, L. & Stapelfeldt, H. (2009). Pure Samples of Individual Conformers: The Separation of Stereoisomers of Complex Molecules Using Electric Fields. Angewandte Chemie International Edition, 48(37), 6900-6902. https://doi.org/10.1002/anie.200902650
Runager, K., Garcia-Castellanos, R., Valnickova, Z., Kristensen, T., Nielsen, N. C., Klintworth, G. K., Gomis-Ruth, F. X. & Enghild, J. J. (2009). Purification, crystallization and preliminary X-raydiffraction of wild-type and mutant recombinanthuman transforming growth factor b-inducedprotein (TGFBIp). Acta Crystallographica Section F:Structural Biology Communications, 65, 299-303.
Franzmann, M., Otzen, D. & Wimmer, R. (2009). Quantitative use of paramagnetic relaxation enhancements for determining orientation and insertion depth of peptides in micelles. ChemBioChem, 10, 2339-2347.
Filsinger, F., Küpper, J., Meijer, G., Holmegaard, L., Nielsen, J. H., Nevo, I., Hansen, J. L. & Stapelfeldt, H. (2009). Quantum-state selection, alignment, and orientation of large molecules using static electric and laser fields. Journal of Chemical Physics, 131(6), 064309. https://doi.org/10.1063/1.3194287
Kristensen, K., Kauczor, J., Kjærgaard, T. & Jørgensen, P. (2009). Quasienergy formulation of damped response theory. Journal of Chemical Physics, 131(4), 044112.
Filsinger, F., Küpper, J., Meijer, G., Hansen, J. L., Maurer, J., Nielsen, J. H., Holmegaard, L. & Stapelfeldt, H. (2009). Reine Proben einzelner Konformere: die Trennung von Stereoisomeren komplexer Moleküle mittels elektrischer Felder. Angewandte Chemie International Edition, 121(37), 7033 - 7035. https://doi.org/10.1002/ange.200902650
Bertelsen, K., Jensen, B. P., Thøgersen, L., Tajkhorshid, E., Schiøtt, H. B., Skrydstrup, T., Nielsen, N. C. & Vosegaard, T. (2009). Residue-Specific Information about the Dynamics of Antimicrobial Peptides from 1H−15N and 2H Solid-State NMR Spectroscopy. Journal of the American Chemical Society, 131(51), 18335–18342. https://doi.org/10.1021/ja908604u
Eigen, N., Bösenberg, U., Bellosta von Colbe, J., Jensen, T. R., Cerenius, Y., Dornheim, M., Klassen, T. & Bormann, R. (2009). Reversible hydrogen storage in NaF-Al composites. Journal of Alloys and Compounds, 477, 76.
Jansik, B., Høst, S., Johansson, M. P., Olsen, J., Jørgensen, P. & Helgaker, T. (2009). Robust and Reliable Multilevel Minimization of the Kohn−Sham Energy. Journal of Chemical Theory and Computation, 5, 1027–1032. https://doi.org/10.1021/ct800562h
Oliveira, C. L. P. D., Behrens, M. A., Pedersen, J. S., Erlacher, K., Otzen, D. & Pedersen, J. S. (2009). SAXS Study of Glucagon Fibrillation: From Monomers to Fibers. Journal of Molecular Biology, 387, 147-161.
Andersen, E. S., Dong, M., Nielsen, M. M., Jahn, K., Subramani, R., Mamdouh, W., Golas, M. M., Sander, B., Stark, H., Oliveira, C. L. P., Pedersen, J. S., Birkedal, V., Besenbacher, F., Gothelf, K. V. & Kjems, J. (2009). Self-assembly of a nanoscale DNA box with a controllable lid. Nature, 459(7243), 73-6. https://doi.org/10.1038/nature07971
Mamdouh, W., Kelly, R. E. A., Dong, M., Jacobsen, M. F., Ferapontova, E., Kantorovich, L., Gothelf, K. V. & Besenbacher, F. (2009).  Self-assembly of artificial nucleobase 1H-benzoimidazole-4,7-dione at the liquid/solid interface. Journal of Physical Chemistry Part B: Condensed Matter, Materials, Surfaces, Interfaces & Biophysical, 113(25), 8675-8681. https://doi.org/10.1021/jp9029419
Goswami, M., Madhu, P. K., Dittmer, J., Nielsen, N. C. & Ganapathy, S. (2009). Sensitivity enhancement of 29Si double-quantum dipolar recoupling spectroscopy by Carr-Purcell-Meiboom-Gill acquisition method. Chemical Physics Letters, 478, 287-291.
Kuimova, M. K., Yahioglu, G. & Ogilby, P. R. (2009). Singlet Oxygen in a Cell: Spatially Dependent Lifetimes and Quenching Rate Constants. Journal of the American Chemical Society, 131, 332-340.
Tran, T. T., Herfort, D., Jakobsen, H. J. & Skibsted, J. (2009). Site Preferences of Fluoride Guest Ions in the Calcium Silicate Phases of Portland Cement from 29Si{19F} CP-REDOR NMR Spectroscopy. Journal of the American Chemical Society, 131(40), 14170-14171. https://doi.org/10.1021/ja905223d
Jakobsen, H. J., Bildsøe, H. K., Skibsted, J., Hansen, M. R., Brorson, M., Srinivasan, B. R. & Bensch, W. (2009). Site Preferences of NH4+ in its Solid Solutions with Cs2WS4 and Rb2WS4 from Multinuclear Solid-State NMR. Inorganic Chemistry, 48(5), 1787-1789.
Larsen, E. K. U., Nielsen, T., Wittenborn, T., Birkedal, H., Vorup-Jensen, T., Jakobsen, M. H., Østergaard, L., Horsman, M. R., Besenbacher, F., Howard, K. A. & Kjems, J. (2009). Size-Dependent Accumulation of PEGylated Silane-Coated Magnetic Iron Oxide Nanoparticles in Murine Tumors. A C S Nano, 3(7), 1947-51. https://doi.org/10.1021/nn900330m
Gyorffy, W., Seidler, P. & Christiansen, O. (2009). Solving the eigenvalue equations of correlated vibrational structure methods: Preconditioning and targeting strategies. Journal of Chemical Physics, 131, 024108.
Taaning, R. H., Lindsay, K. B., Skrydstrup, T. & Taaning, R. H. (2009). Some unusual reactivities in the SmI2-mediated reductive coupling of acrylamides and acrylates with imides. Tetrahedron, 65(52), 10908-10916.
Taaning, R., Lindsay, K. & Skrydstrup, T. (2009). Some unusual reactivities in the SmI2-mediated reductive coupling of acrylamides and acrylates with imides. Tetrahedron, 65, 10908.
Kragh Sørensen, L., Fleig, T. & Olsen, J. (2009). Spectroscopic and electric properties of the LiCs molecule: a coupled cluster study including higher excitations. Journal of Physics B: Atomic, Molecular and Optical Physics, 42(16), 165102.
Reinau, M. E. & Otzen, D. (2009). Stability and structure of the membrane protein transporter Ffh is modulated by substrates and lipids. Archives of Biochemistry and Biophysics, 492, 48-53.
Hansen, J. H., Petersen, S. V., Andersen, K. K., Enghild, J. J., Damhus, T. & Otzen, D. (2009). Stable intermediates determine proteins' primary unfolding sites in the presence of surfactants. Biopolymers, 91(3), 221-31. https://doi.org/10.1002/bip.21125
Britz, D., Oldham, K. B. & Østerby, O. (2009). Strategies for damping the oscillations of the alternating direction implicit method of simulation of diffusion-limited chronoamperometry at disk electrodes. Electrochimica Acta, 54, 4822-4828.
Stec-Niemczyk, J., Pustelny, K., Kisielewska, M., Bista, M., Boulware, K., Stennicke, H., Thøgersen, I., Daugherty, P., Enghild, J., Popowicz, G., Dubin, A., Potempa, J. & Dubin, G. (2009). Structural and functional characterization of SplA, an exclusively specific protease of Staphylococcus aureus. Biochemical Journal. https://doi.org/10.1042/BJ20081351
Bäverbäck, P., Oliveira, C. L. P., Garamus, V. M., Varga, I., Claesson, P. M. & Pedersen, J. S. (2009). Structural Properties of β-Dodecyklamaltoside an C12E6 Mixed Micelles. Langmuir, 7296-7303.
Arnbjerg, L. M., Bomholdt Ravnsbæk, D., Filinchuk, Y., Vang, R. T., Cerenius, Y., Besenbacher, F., Jørgensen, J. E., Jakobsen, H. J. & Jensen, T. R. (2009). Structure and Dynamics for LiBH4-LiCl Solid Solutions. Chemistry of Materials, 21(24), 5772-5782. https://doi.org/10.1021/cm902013k
Hansen, M. R., Jakobsen, H. J. & Skibsted, J. (2009). Structure and Dynamics of Hydrous Surface Species on Alumina-Boria Catalysts and Their Precursors from 1H, 2H, 11B, and 27Al MAS NMR Spectroscopy. Journal of Physical Chemistry Part C: Nanomaterials and Interfaces, 113(6), 2475-2486.
Lindhardt, A. T., Gøgsig, T. & Skrydstrup, T. (2009). Studies on the 1,2-Migrations in Pd-Catalyzed Negishi Couplings with JosiPhos Ligands. Journal of Organic Chemistry, 74, 135.
Miserez, A., Weaver, J. C., Kisailus, D. & Birkedal, H. (2009). Sucker Rings from the Humboldt Squid Dosidicus gigas: The Role of Nanotubule Architecture on the Mechanical Properties. Materials Research Society Symposium Proceedings, 1187.
Malmos, K., Iruthayaraj, J., Pedersen, S. U. & Daasbjerg, K. (2009).  General Approach for Monolayer Formation of Covalently Attached Aryl Groups through Electrografting of Arylhydrazines. Journal of the American Chemical Society, 131, 13926-13927.
Cabré, E., Malmström, J., Sutherland, D., Perez-Gil, J. & Otzen, D. (2009). Surfactant protein SP-B strongly modifies surface collapse of phospholipid vesicles: Insights from a quartz crystal microbalance with dissipation. Biophysical Journal, 97(3), 768-76. https://doi.org/10.1016/j.bpj.2009.04.057
Nielsen, A. B., Bjerring, M., Nielsen, J. T. & Nielsen, N. C. (2009). Symmetry-based dipolar recoupling by optimum control: Band selective experiments for assignment of solid-state NMR spectra of proteins. Journal of Chemical Physics, 131, 025101-1-025101-11. https://doi.org/10.1063/1.3157737
Jacobsen, M. F., Ferapontova, E. & Gothelf, K. V. (2009). Synthesis and electrochemical studies of an anthraquinone-conjugated nucleoside and derived oligonucleotides. Organic and Biomolecular Chemistry, 7(5), 905-908. https://doi.org/10.1039/B816820B
Mittag, T., Nielsen, N. C., Otzen, D. & Skrydstrup, T. (2009). Synthesis of a Ketomethylene Isostere of the Fibrillating Peptide SNNFGAILSS. Journal of Organic Chemistry, 74, 7955-7957.
Andersen, C. S. & Gothelf, K. V. (2009). Synthesis of functional molecular rod oligomers. Organic and Biomolecular Chemistry, 7, 58-60.

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Department of Chemistry