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Department of Chemistry

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Papers

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Andersen, N. K., Spacilova, L., Jensen, M. D., Kocalka, P., Jensen, F. & Nielsen, P. (2008). A Click Chemistry Approach Towards Nucleic Acid Major Groove Functionalization. Nucleic Acids Symposium Series, (52), 149-150. https://doi.org/10.1093/nass/nrn076

Kraft, J. F., Koldsø, H., Sinning, S., Severinsen, K., Wiborg, O. & Schiøtt, H. B. (2008). Binding of 1-Phenylpiperazine to the human Serotonin Transporter: A computational study. Poster session presented at ISQBP 2008.

Kraft, J. F., Koldsø, H., Sinning, S., Wiborg, O. & Schiøtt, H. B. (2008). Binding of 1-Phenylpiperazineto the human Serotonin Transporter: A computational study. Poster session presented at EMBO workshop, Paris, France.

Kraft, J. F., Koldsø, H., Sinning, S., Severinsen, K., Wiborg, O. & Schiøtt, H. B. (2008). Binding of 1-Phenylpiperazineto the human Serotonin Transporter: A computational study. Poster session presented at iNANO autumn school 2008.

Musgaard, M., Morth, J. P., Nissen, P. & Schiøtt, H. B. (2008). Binding of Inhibitors to P-type ATPases. Poster session presented at 6th iNANO Annual Meeting, Aarhus, Denmark.

Celik, L., Sinning, S., Severinsen, K., Hansen, C. G., Møller, M. S., Bols, M., Wiborg, O. & Schiøtt, B. (2008). Binding of Serotonin to the Human Serotonin Transporter. Molecular Modeling and Experimental Validation. Journal of the American Chemical Society, 3853-3865.

Schiøtt, B. & Lie, M. A. (2008). DFT Study of Solvation Effects on the Tautomeric Equlibrium and Catalytic Ylide Generation of Thiamin Models. Journal of Computational Chemistry, 29, 1037-1047.

Celik, L., Lund, J. D. D. & Schiøtt, B. (2008). Exploring Interactions of Endocrine Disrupting Compounds with Different Conformations of the Human Estrogen Receptor α. A Molecular Docking Study. Chemical Research in Toxicology, 21(11), 2195-2206. https://doi.org/10.1021/tx800278d

Koldsø, H., Celik, L. & Schiøtt, H. B. (2008). Homology Modelling of the Human Serotonin Transporter. Poster session presented at 6th iNANO Annual Meeting.

Celik, L., Musgaard, M., Koldsø, H., Sinning, S., Severinsen, K., Wiborg, O. & Schiøtt, H. B. (2008). How Do Tricyclic Antidepressants Bind in the Human Serotonin Transporter? Molecular Modelling Studies and Biochemical Validation. Poster session presented at Biophysical Society Annual Meeting, Long Beach, United States.

Musgaard, M., Celik, L., Koldsø, H., Sinning, S., Severinsen, K., Wiborg, O. & Schiøtt, H. B. (2008). How do Tricyclic Antidepressants Bind in the Human Serotonin Transporter? Molecular Modelling Studies with Biochemical Validation. Poster session presented at ISQBP President's Meeting, Ascona, Switzerland.

Jensen, F. (2008). Large Scale Computations in Biological Chemistry. Paper presented at Large Scale Simulations of Complex Systems, Condensed Matter and Fusion Plasma, Zaragoza, Spain.

Musgaard, M., Thøgersen, L. & Schiøtt, H. B. (2008). Molecular Dynamics Simulations of the E2 Form of the Ca²⁺-ATPase: Preliminary Results. Poster session presented at 12^th International ATPase Conference. Na,K-ATPase and Related Transport ATPases of P-type: Structures, Mechanisms, and Roles in Health and Disease, Aarhus, Denmark.

Benedikt, U., Auer, A. A. & Jensen, F. (2008). Optimization of Augmentation Functions for Correlated Calculations of Spin-spin Coupling Constants and Related Properties. Journal of Chemical Physics, (129), 064111-1 - 8. https://doi.org/10.1063/1.2962973

Severinsen, K., Koldsø, H., Tran, M., Sinning, S., Jensen, H. H., Schiøtt, H. B. & Wiborg, O. (2008). Orientering af S- og R-citalopram i serotonintransporteren - Computermodeller og biokemisk validering. Poster session presented at Orientering af S- og R-citalopram i serotonintransporteren - Computermodeller og biokemisk validering, Risskov, Denmark.

Musgaard, M. & Schiøtt, H. B. (2008). P-Type ATPases - the Catalytic Cycle. Poster session presented at ISQBP President's Meeting, Ascona, Switzerland.

Thøgersen, L., Schiøtt, B., Vosegaard, T., Nielsen, N. C. & Tajkhorshid, E. (2008). Peptide Aggregation and Pore Formation in a Lipid Bilayer: A Combined Coarse-Grained and All Atom Molecular Dynamics Study. Biophysical Journal, 95(9), 4337-4347. https://doi.org/10.1529/biophysj.108.133330

Vosegaard, T., Bertelsen, K., Pedersen, J. M., Thøgersen, L., Schiøtt, B., Tajkhorshid, E., Skrydstrup, T. & Nielsen, N. C. (2008). Resolution Enhancement in Solid-State NMR of Oriented Membrane Proteins by Anisotropic Differential Linebroadening. Journal of the American Chemical Society, 130, 5028-5029.

Koldsø, H. & Schiøtt, H. B. (2008). Serotonin Binding and Dynamics in the Human Serotonin Transporter. Poster session presented at SFB-Symposium 08, Vienna, Austria.

Drenck, K., Jensen, F., Olsen, J. & Nielsen, S. B. (2008). Stability of the three tetracoordinated dianions Ni(CN)^2-₄, Cr(SCN)^2-_{4 ,}and Cu(N₃)^2-₄. Chemical Physics, 353, 189-192.

Koldsø, H., Celik, L., Sinning, S., Severinsen, K., Wiborg, O. & Schiøtt, H. B. (2008). Substrate Binding and Dynamics in the Human Serotonin Transporter. Poster session presented at ISQBP 2008, Ascona, Switzerland.

Celik, L., Schiøtt, H. B. & Tajkhorshid, E. (2008). Substrate Binding and Formation of an Occluded State in the Leucine Transporter. Biophysical Journal, 94(5), 1600-1612. https://doi.org/10.1529/biophysj.107.117580

Stanchev, S., Jensen, F. & Manolov, I. (2008). Synthesis and DFT study of the spectral behavior of new 4-hydroxycoumarins. International Journal of Quantum Chemistry, (108), 1340-1351. https://doi.org/10.1002/qua.21628

Stanchev, S., Momekov, G., Jensen, F. & Manolov, I. (2008). Synthesis, Computational Study and Cytotoxic Activity of new 4-Hydroxycoumarin Derivatives. European Journal of Medicinal Chemistry, (43), 694-706. https://doi.org/10.1002/chin.200835132

Kaminsky, J., Jensen, F., Mata, R. A. & Werner, H-J. (2008). The Accuracy of Local MP2 Methods for Conformational Energies. Molecular Physics, (106), 1899-1906. https://doi.org/10.1080/00268970802360355

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Revised 04.01.2023